Protein Alignment Rab1 and rab11a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001007360.1
• Gene: rab11a / 492487
• ZFINID: ZDB-GENE-041114-53
• Length: 215
• Species: Danio rerio
• Alignment Length: 212
• Identity: 104/212 - (49%)
• Similarity: 137/212 - (64%)
• Gaps: 7/212 - (3%)

  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |.:.:.|||||||::||||||||||.||.||..:.:.....|||||:|..|:|::||||:|.|||
Zfish     1 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65

  Fly    66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
            |||||||:|.|||:|||||.|.::|||.....::.||::||:|:..:|..|:..:||||||||..
Zfish    66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 130

  Fly   131 KKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP--SSATDN----ASKV 189
            .:.|....|..:|.:.|:.||||||..:||||.||.|:..||...|...  |...||    ::.|
Zfish   131 LRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDRRDNDMSPSNNV 195

  Fly   190 KIDQGRPVEN-TKSGCC 205
            ...|.:|.|| .|..||
Zfish   196 VSIQVQPTENKPKMQCC 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	88/164 (54%)
rab11a	NP_001007360.1	Rab11_like	9..173	CDD:206660	88/163 (54%)