DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab6

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_061510386.1 Gene:Rab6 / 4577653 VectorBaseID:AGAMI1_003514 Length:285 Species:Anopheles gambiae


Alignment Length:174 Identity:70/174 - (40%)
Similarity:112/174 - (64%) Gaps:5/174 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:.:|:..|||:.|:.||..|::..:|.:|||:||..:|:.|:.:|::||:||||||||||::
Mosquito    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ..||.|.:...:||||.|:..||:...:|::::......:|..:|||||:||:.|:.|.......
Mosquito    79 IPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 143

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
            .|.:|.:.|:|||||:..||:|.|..:||.:     |...:|:|
Mosquito   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAAL-----PGMDSTEN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 67/162 (41%)
Rab6XP_061510386.1 None

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