Protein Alignment Rab1 and rab4b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001004002.1
• Gene: rab4b / 445498
• ZFINID: ZDB-GENE-040822-15
• Length: 213
• Species: Danio rerio
• Alignment Length: 209
• Identity: 90/209 - (43%)
• Similarity: 125/209 - (59%)
• Gaps: 14/209 - (6%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||:|||.|:||.:|.||||||.:|.::.:.:....||||:|..|.:.:.|||:||||||||||||
Zfish     5 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 69

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            ||::|.||||||.|.::|||.|.:|::|.:..||.:....|..|:..:|.|||.||...:.|...
Zfish    70 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFL 134

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATD-----------NASKVKI 191
            .|:.:|.:..:.||||||.:..|||:||:..|..|.|::  .|...|           :||..:|
Zfish   135 EASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKI--ESGELDPERMGSGIQYGDASLRQI 197

  Fly   192 DQGR-PVENTKSGC 204
            .|.| ....||..|
Zfish   198 RQPRGSAAQTKQQC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	77/164 (47%)
rab4b	NP_001004002.1	Rab4	9..169	CDD:206696	75/159 (47%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P61106	39..44		3/4 (75%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P61106	65..74		7/8 (88%)