Protein Alignment Rab1 and rab3db

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: XP_005168533.1
• Gene: rab3db / 436952
• ZFINID: ZDB-GENE-040718-428
• Length: 231
• Species: Danio rerio
• Alignment Length: 163
• Identity: 78/163 - (47%)
• Similarity: 121/163 - (74%)
• Gaps: 0/163 - (0%)

  Fly     3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
            :.:..:||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:..:.|.||||||||
Zfish    27 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNNKRIKLQIWDT 91

  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKK 132
            |||||:||||::|||||.|.::::|.|:::|||.|:.|..:|:.|:.:|...:|||||.||..::
Zfish    92 AGQERYRTITTAYYRGAMGFLLMFDITNRDSFNAVRDWATQIKTYSWDNAQVILVGNKCDLEDER 156

  Fly   133 VVDHTTAAEYAAQLGIPFLETSAKSATNVEQAF 165
            ::....:...|.:||..|.|.|||.:.||:|.|
Zfish   157 LIPTEDSQRLAHELGFQFFEASAKDSINVKQVF 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	77/156 (49%)
rab3db	XP_005168533.1	P-loop_NTPase	35..199	CDD:304359	76/155 (49%)
		RAB	36..196	CDD:197555	76/154 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910