DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and rab10

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:200 Identity:109/200 - (54%)
Similarity:143/200 - (71%) Gaps:7/200 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||.||||||||||||||:|:|.||:||.:..::|||||:||||:|:||.||.|||||||||||||
Zfish     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            |.|||:||||||.||::|||.|:.:||.|:.:||..|:.:|.|:|.::|:|||.|:..|:||...
Zfish    71 FHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKA 135

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEI--KNRVGPPSSATDNASKVKIDQGRPVENT 200
            ...:.|.:.||.|.|||||:..|:|:||:|:|.:|  |..|..|     |:..|.|..|..|...
Zfish   136 KGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEP-----NSENVDISTGGGVTGW 195

  Fly   201 KSGCC 205
            |:.||
Zfish   196 KTKCC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 97/166 (58%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 97/165 (59%)

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