Protein Alignment Rab1 and rab4a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001119853.1
• Gene: rab4a / 403031
• ZFINID: ZDB-GENE-040525-1
• Length: 213
• Species: Danio rerio
• Alignment Length: 169
• Identity: 78/169 - (46%)
• Similarity: 113/169 - (66%)
• Gaps: 0/169 - (0%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            ||:|||.|:||::|.||||||.:|.:..:.:....||||:|..:.|.:..|.:||||||||||||
Zfish     5 YDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWDTAGQER 69

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            ||::|.||||||.|.::|||.|.:|::|.:..||.:....|.:|:..:|.|||.||...:.|...
Zfish    70 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFL 134

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            .|:.:|.:..:.||||||.:..|||:||:..|.:|.|::
Zfish   135 EASRFAQENELMFLETSALTGENVEEAFVQCARKILNKI 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	75/164 (46%)
rab4a	NP_001119853.1	Rab4	9..169	CDD:206696	73/159 (46%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P61106	39..44		3/4 (75%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P61106	65..74		7/8 (88%)