DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and rab35l

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_989002.1 Gene:rab35l / 394598 XenbaseID:XB-GENE-5809894 Length:201 Species:Xenopus tropicalis


Alignment Length:27 Identity:8/27 - (29%)
Similarity:12/27 - (44%) Gaps:0/27 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LGKRSRFGAAAASGSSEQQQQLKAEQL 175
            ||.:...||..:.....|.:|..:|.|
 Frog    36 LGLKGNGGAVLSMALPFQPEQRDSEDL 62

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 7/25 (28%)
rab35lNP_989002.1 P-loop containing Nucleoside Triphosphate Hydrolases 4..201 CDD:476819 8/27 (30%)

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