DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and rab7a

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_957222.1 Gene:rab7a / 393902 ZFINID:ZDB-GENE-040426-1352 Length:207 Species:Danio rerio


Alignment Length:205 Identity:72/205 - (35%)
Similarity:113/205 - (55%) Gaps:19/205 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 75
            |.|::::|||||||:.|:.::.:..::..|.:|||.||..:.:.:|.:.:.:|||||||||||::
Zfish     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    76 ITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYAC----ENVNKLLVGNKSDLTTKKVVDH 136
            :..::||||...::|:|.|...:|..:..|.:|....|.    ||...:::|||.||..::|...
Zfish    73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVTTK 137

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMA---------AEIKNRVGPPSSATDNASKVKID 192
            ...|...::..||:.|||||.|.||||||.|:|         .|:.|....|.....|      |
Zfish   138 RAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDRN------D 196

  Fly   193 QGRPVENTKS 202
            :.:|...|.|
Zfish   197 RAKPSAETCS 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 65/176 (37%)
rab7aNP_957222.1 Rab7 9..179 CDD:206655 63/169 (37%)

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