Protein Alignment Rab1 and rab5c

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_958909.1
• Gene: rab5c / 386807
• ZFINID: ZDB-GENE-031118-30
• Length: 221
• Species: Danio rerio
• Alignment Length: 195
• Identity: 81/195 - (41%)
• Similarity: 116/195 - (59%)
• Gaps: 1/195 - (0%)

  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:|:|:|.||||.|:|||....:.|...||||..|..:|:.||..|:|.:|||||||||:.::
Zfish    23 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSL 87

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ...|||||...|||||.|:.::|...|.|::|::|.|..|:...|.|||:||..|:.||...|..
Zfish    88 APMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQRQASPNIVIALAGNKADLANKRAVDFQEAQA 152

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKSG-CC 205
            ||....:.|:|||||:|.||.:.||.:|.::........:.:...::..:|........:|| ||
Zfish   153 YADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKSEPQGGAGSGGRARGGVDLQETAPQGRSGQCC 217

  Fly   206  205
            Zfish   218  217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	76/162 (47%)
rab5c	NP_958909.1	Rab5_related	22..184	CDD:206653	76/160 (48%)