Protein Alignment Rab1 and RabX5

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_647644.2
• Gene: RabX5 / 38209
• FlyBaseID: FBgn0035255
• Length: 277
• Species: Drosophila melanogaster
• Alignment Length: 215
• Identity: 75/215 - (34%)
• Similarity: 109/215 - (50%)
• Gaps: 28/215 - (13%)

  Fly    13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT 77
            |::.:||..|||:.::.||..|.:..:|.:||||||::....:.|....|::||||||||||.|.
  Fly    66 KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIA 130

  Fly    78 SSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNK----LLVGNKSDLTTKK--VVDH 136
            .:|||.|..|:|.||.:.::|..:.|:||.....|   |.:|    .|||.|:||.:|:  |...
  Fly   131 GAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNY---NASKRPLVFLVGTKADLLSKEEFVRME 192

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAA------------EIKNRVGPPSSATDNASKV 189
            ..|...||:|...:...||:|...|.:.|..:||            .|||:  |...||..:.|.
  Fly   193 RLAGLAAAELQAEYWSVSARSGFKVTELFQRIAALAFEEAVMQEIRSIKNK--PQEQATQASVKS 255

  Fly   190 KIDQ-----GRPVENTKSGC 204
            :...     |..:...||||
  Fly   256 QTFDLRNFFGSRLSQQKSGC 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	65/179 (36%)
RabX5	NP_647644.2	P-loop_NTPase	66..230	CDD:304359	63/166 (38%)
		RAB	66..225	CDD:197555	61/161 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454487
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840