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Protein Alignment Rab1 and Rab4
DIOPT Version :9
Sequence 1: | NP_732610.1 |
Gene: | Rab1 / 42524 |
FlyBaseID: | FBgn0285937 |
Length: | 205 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_523777.1 |
Gene: | Rab4 / 36992 |
FlyBaseID: | FBgn0016701 |
Length: | 213 |
Species: | Drosophila melanogaster |
Alignment Length: | 180 |
Identity: | 86/180 - (47%) |
Similarity: | 117/180 - (65%) |
Gaps: | 10/180 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
||||||.|:||.:|.||||||..|.:..:.:....||||:|..|.:.:.||::||||||||||||
Fly 5 YDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQER 69
Fly 73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
||::|.||||||.|.::|||.|.::|||.:..||.:....|..|:..||||||.||...:.|...
Fly 70 FRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVTFL 134
Fly 138 TAAEYAAQLGIPFLETSAKSATNVEQAFM----TMAAEIK------NRVG 177
.|:.:|.:..:.|||||||:..|||:||: |:.|:|: .|:|
Fly 135 EASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIG 184
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454486 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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