Protein Alignment Rab1 and Rabl6

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001102043.1
• Gene: Rabl6 / 362084
• RGDID: 1307615
• Length: 731
• Species: Rattus norvegicus
• Alignment Length: 182
• Identity: 38/182 - (20%)
• Similarity: 79/182 - (43%)
• Gaps: 39/182 - (21%)

  Fly    10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT----IKLQIWDTAGQ 70
            |..|:::.||...||:.|..|.....:.|.||.|  .:.::.:|..:.||    :|:::||...:
  Rat    42 YNMKIVIRGDRNTGKTALWHRLQGKKFVEEYIPT--QEIQVTSIHWNYKTTDDVVKVEVWDVVDK 104

  Fly    71 -------------------ERFRTITSSY---YRGAHGIIVVYDCTDQESFNNVKQWLEEIERYA 113
                               |....:.:.:   |:..:|:::::|.|.|.:||.|.:.|.::..:
  Rat   105 GKCKKRGDCLKTENDPQEAESEMALDAEFLDVYKNCNGVVMMFDITKQWTFNYVLRELPKVPTH- 168

  Fly   114 CENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIP-------FLETSAKSA 158
               |...::||..|:...:|:......::...|..|       :.|:|.|::
  Rat   169 ---VPVCVLGNYRDMGEHRVILPDDVRDFIEHLDRPPGSSYFRYAESSMKNS 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	38/182 (21%)
Rabl6	NP_001102043.1	P-loop_NTPase	44..221	CDD:304359	37/180 (21%)
		Ras	45..221	CDD:278499	37/179 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900