Protein Alignment Rab1 and Rab3

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_523687.1
• Gene: Rab3 / 36127
• FlyBaseID: FBgn0005586
• Length: 220
• Species: Drosophila melanogaster
• Alignment Length: 208
• Identity: 86/208 - (41%)
• Similarity: 134/208 - (64%)
• Gaps: 6/208 - (2%)

  Fly     3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
            :.:..:||:||||:||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.:|||||||
  Fly    13 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77

  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKK 132
            |||||:||||::|||||.|.|::||.|:::|||:|:.|:.:|:.|:.:|...:|||||.|:..::
  Fly    78 AGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQR 142

  Fly   133 VVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG------PPSSATDNASKVKI 191
            |:......:.|.|||:.|.|||||...||:..|..:...|.:::.      |.........:...
  Fly   143 VISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSESLDADPTLVGGGQKGQRLT 207

  Fly   192 DQGRPVENTKSGC 204
            ||.:...|....|
  Fly   208 DQPQGTPNANCNC 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	80/164 (49%)
Rab3	NP_523687.1	Rab3	21..185	CDD:206657	79/163 (48%)