DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab14

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:203 Identity:88/203 - (43%)
Similarity:128/203 - (63%) Gaps:4/203 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |::....|:|:||.::|||.||||||||.:|.:..:..:...||||:|..|.||:|.|.||||||
  Fly    25 MTAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIW 89

  Fly    66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTT 130
            |||||||||.:|.||||||.|.::|||.|.:.::|::..||.:.......:....|:||||||.:
  Fly    90 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLES 154

  Fly   131 KKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATD-NASKVKIDQG 194
            .:.|.:..|.|:|.:.|:.|||.||.:..|||:||:..|.:|...:  .....| |||:..: |.
  Fly   155 TREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNI--QEGRLDLNASESGV-QH 216

  Fly   195 RPVENTKS 202
            ||.:.:::
  Fly   217 RPSQPSRT 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 79/164 (48%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 79/164 (48%)

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