Protein Alignment Rab1 and CG4789

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_573166.1
• Gene: CG4789 / 32668
• FlyBaseID: FBgn0030792
• Length: 274
• Species: Drosophila melanogaster
• Alignment Length: 117
• Identity: 33/117 - (28%)
• Similarity: 61/117 - (52%)
• Gaps: 15/117 - (12%)

  Fly    13 KLLLIGDSGVGKSCL--LLRFADDTYTESYIS---TIGVDFKIRTIELDGKTIK-----LQIWDT 67
            :::::|||||||:.|  |:     |:.|:.|.   |:|.:.:::.......|.:     ::::|.
  Fly     8 RIVVVGDSGVGKTSLTHLI-----THNEALIRPGWTVGCNIQVKMHPFREGTARECPYFVELFDV 67

  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNK 119
            .|....:...|.:|.|..|||:|:|.|:.:|...:..||.||.....::.||
  Fly    68 GGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIVNKEGKDTNK 119

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	33/117 (28%)
CG4789	NP_573166.1	P-loop_NTPase	7..228	CDD:304359	33/117 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454481
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940