DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and RAB37

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001006639.1 Gene:RAB37 / 326624 HGNCID:30268 Length:223 Species:Homo sapiens


Alignment Length:207 Identity:86/207 - (41%)
Similarity:135/207 - (65%) Gaps:15/207 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTY-TESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :|.||...|::|:||:||||:|.|::|.|..: :.::|:|:|:||:.:.:.:||..:||||||||
Human    23 SPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTA 87

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||||::|.:|||.|..::::||.|::.||:|::.||.||..||..:|..:|:|||:|:::::|
Human    88 GQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERV 152

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG-----PPSSATDNASKVKIDQ 193
            :........|.:.|:||||||||:..|||.||:.:|.|:|.|.|     |.....|.....|   
Human   153 IRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYVESQK--- 214

  Fly   194 GRPVENTKSGCC 205
                  .:|.||
Human   215 ------KRSSCC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 75/165 (45%)
RAB37NP_001006639.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 86/207 (42%)
Rab26 31..220 CDD:206695 81/197 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 52..67 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 85..102 12/16 (75%)

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