Protein Alignment Rab1 and Rab33a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001101727.1
• Gene: Rab33a / 317580
• RGDID: 1563280
• Length: 237
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 84/206 - (40%)
• Similarity: 121/206 - (58%)
• Gaps: 18/206 - (8%)

  Fly    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR- 74
            :||:::||||.|||:||..||...|:.:...:||||||:.:|:|::|:.||:|:||||||||||
  Rat    36 IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQERFRK 100

  Fly    75 TITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACEN-VNKLLVGNKSDLTTKKVVDHTT 138
            ::...|||..|.::.|||.|...||.|:|.|::|...:|... |.|:|||||.||..:..|....
  Rat   101 SMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDLREQIQVPSNL 165

  Fly   139 AAEYAAQLGIPFLETSA---KSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGR----- 195
            |.::|....:...||||   |.:.|||..||.:|..:|   ...|....:|.:   .||:
  Rat   166 ALKFADAHNMLLFETSAKDPKESQNVESIFMCLACRLK---AQKSLLYRDAER---QQGKVQTLE 224

  Fly   196 -PVE-NTKSGC 204
             |.| |:|:.|
  Rat   225 FPQEANSKTSC 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	75/168 (45%)
Rab33a	NP_001101727.1	Rab33B_Rab33A	35..204	CDD:133315	75/170 (44%)