Protein Alignment Rab1 and Rab39

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_572405.2
• Gene: Rab39 / 31684
• FlyBaseID: FBgn0029959
• Length: 218
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 89/224 - (39%)
• Similarity: 127/224 - (56%)
• Gaps: 29/224 - (12%)

  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDT 67
            |.|.::|.|:|:|||||.||||.||..|.|..:.|....|:||||..|.||: ||..||||:|||
  Fly     2 VEPIFEYQFRLILIGDSTVGKSSLLKFFTDGKFAELSDPTVGVDFFARLIEMKDGTQIKLQLWDT 66

  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERY-----------ACENVNKLL 121
            |||||||:||.||||.:.|:::|||.::..||.::..|:.|.:|:           .|: ::.:.
  Fly    67 AGQERFRSITKSYYRNSVGVLLVYDISNHASFEHIPLWMMEAQRHIEPHRPVFALVGCK-LDLIN 130

  Fly   122 VGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV-GPPSSATDN 185
            .|...::||::      |.::|.|.|:.|:||||:|..|||:||..:..|:..|: .....|.|.
  Fly   131 AGGHREVTTEE------AQKFAKQHGLHFVETSARSGANVEEAFRMVTQEVYARIRSGEYKAEDG 189

  Fly   186 ASKVKIDQGRP---------VENTKSGCC 205
            ...:|....||         .|..||.||
  Fly   190 WDGIKSGFSRPNSLDFNLVVAEPEKSSCC 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	76/176 (43%)
Rab39	NP_572405.2	Rab39	8..218	CDD:133311	85/216 (39%)