Protein Alignment Rab1 and Rab27

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_726743.1
• Gene: Rab27 / 31103
• FlyBaseID: FBgn0025382
• Length: 236
• Species: Drosophila melanogaster
• Alignment Length: 196
• Identity: 68/196 - (34%)
• Similarity: 117/196 - (59%)
• Gaps: 7/196 - (3%)

  Fly    13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK----TIKLQIWDTAGQERF 73
            :.|::|||||||:|||.::.|..:...:|||:|:||:.:.:..:.:    .|.||||||||||||
  Fly    19 QFLVLGDSGVGKTCLLYQYTDGRFHTQFISTVGIDFREKRLLYNSRGRRHRIHLQIWDTAGQERF 83

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYA-CENVNKLLVGNKSDLTTKKVVDHT 137
            |::|:::||.|.|.::::|.|.::||.....||.::..:| .|:.:.:|.|||.||...:||...
  Fly    84 RSLTTAFYRDAMGFLLIFDLTSEKSFLETANWLSQLRTHAYSEDPDVVLCGNKCDLLQLRVVSRD 148

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKS 202
            ..|....:..:|::||||.:..||::|...:...:..|:  .::|.:....:.:.|.|.:.|...
  Fly   149 QVAALCRRYRLPYIETSACTGANVKEAVELLVGRVMERI--ENAACNREFSLLLTQSRCLPNIAY 211

  Fly   203 G 203
            |
  Fly   212 G 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	62/166 (37%)
Rab27	NP_726743.1	P-loop_NTPase	19..187	CDD:304359	62/167 (37%)
		RAB	20..186	CDD:197555	62/165 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454484
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840