Protein Alignment Rab1 and Ift27

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001123967.1
• Gene: Ift27 / 300062
• RGDID: 1308703
• Length: 186
• Species: Rattus norvegicus
• Alignment Length: 165
• Identity: 55/165 - (33%)
• Similarity: 92/165 - (55%)
• Gaps: 7/165 - (4%)

  Fly    13 KLLLIGDSGVGKSCLLLRFADD--TYTESYISTIGVDFKIRTIE-LD-GKTIKLQIWDTAGQERF 73
            |.:|.||..|||:.|:..|..|  .:.::|..|.|||..::|:. || ..:::|.|:|:||:|.|
  Rat     7 KCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIFDSAGKELF 71

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVN--KLLVGNKSDLTTKKVVDH 136
            ..:....:...:.:.:|||.|:::||.:..:|||:: |.....::  .:|||.|:||..::.||.
  Rat    72 SEMLDKLWENPNVLCLVYDVTNEQSFISCTKWLEKV-RSQTPGISLPGVLVGTKTDLAGRQTVDS 135

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE 171
            ..|..:|...|:.|.|||.|...|.|..|..:|.:
  Rat   136 AQAQAWALSQGLEFFETSVKEMDNYEAPFHCLAKQ 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	55/165 (33%)
Ift27	NP_001123967.1	P-loop containing Nucleoside Triphosphate Hydrolases	6..172	CDD:476819	55/165 (33%)