Protein Alignment Rab1 and Rab5b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001073405.1
• Gene: Rab5b / 288779
• RGDID: 1306489
• Length: 215
• Species: Rattus norvegicus
• Alignment Length: 195
• Identity: 83/195 - (42%)
• Similarity: 119/195 - (61%)
• Gaps: 3/195 - (1%)

  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:|:|:|.||||.|:|||....:.|...||||..|..:::.||..|:|.:|||||||||:.::
  Rat    21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ...|||||...|||||.|:||:|...|.|::|::|.|..::...|.|||:||..|::|::..|..
  Rat    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEI-KNRVGPPSSATDNASKVKIDQGRPVENTKSGCC 205
            ||....:.|:|||||:|.||...|:.:|.:: |:....|..|...:..|  |.....:..||.||
  Rat   151 YADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNPGGAAGRSRGV--DLHEQAQQNKSQCC 213

  Fly   206  205
              Rat   214  213

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	75/163 (46%)
Rab5b	NP_001073405.1	Rab5_related	20..182	CDD:206653	74/160 (46%)