Protein Alignment Rab1 and Rab35

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001013064.1
• Gene: Rab35 / 288700
• RGDID: 1306362
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 205
• Identity: 114/205 - (55%)
• Similarity: 145/205 - (70%)
• Gaps: 13/205 - (6%)

  Fly     7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
            :||:|||||:|||||||||.|||||||:|::.|||:||||||||||:|::|:.:|||||||||||
  Rat     4 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68

  Fly    72 RFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDH 136
            |||||||:||||.||:|||||.|..|||.|||:||.||.: .|::|.::|||||:|...:|||:.
  Rat    69 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKNDDPERKVVET 132

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPV---- 197
            ..|.::|.|:||...|||||...|||:.| ....|:..|     :..||.:|.:..|...|
  Rat   133 EDAYKFAGQMGIQLFETSAKENVNVEEMF-NCITELVLR-----AKKDNLAKQQQQQQNDVVKLT 191

  Fly   198 --ENTKSGCC 205
              ...|..||
  Rat   192 KNSKRKKRCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	103/164 (63%)
Rab35	NP_001013064.1	Rab35	3..201	CDD:133310	112/203 (55%)
		Effector region. /evidence=ECO:0000250	37..45		6/7 (86%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920