Protein Alignment Rab1 and Rab5c

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001099310.2
• Gene: Rab5c / 287709
• RGDID: 1307095
• Length: 216
• Species: Rattus norvegicus
• Alignment Length: 195
• Identity: 83/195 - (42%)
• Similarity: 119/195 - (61%)
• Gaps: 3/195 - (1%)

  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:|:|:|.||||.|:|||....:.|...||||..|..:|:.||..|:|.:|||||||||:.::
  Rat    22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSL 86

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ...|||||...|||||.|:.::|...|.|::|::|.|..|:...|.|||:||.:|:.|:...|..
  Rat    87 APMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQA 151

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEI-KNRVGPPSSATDNASKVKIDQGRPVENTKSGCC 205
            ||....:.|:|||||:|.||.:.||.:|.:: ||.....:.|......|.:.:..|.  ::|.||
  Rat   152 YADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRNRGVDLQESNPA--SRSQCC 214

  Fly   206  205
              Rat   215  214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	76/163 (47%)
Rab5c	NP_001099310.2	Rab5_related	21..183	CDD:206653	75/160 (47%)