DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and RAB26

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_055168.2 Gene:RAB26 / 25837 HGNCID:14259 Length:256 Species:Homo sapiens


Alignment Length:199 Identity:86/199 - (43%)
Similarity:133/199 - (66%) Gaps:5/199 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTY-TESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
            ||..||::|:|||||||:|||:||.|..: ..::|||:|:||:.:.:::||..:|||:|||||||
Human    60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124

  Fly    72 RFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDH 136
            |||::|.:|||.||.::::||.|::.||:|::.||.||..||..:|..:|:|||.|...::||..
Human   125 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHERVVKR 189

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTK 201
            ....:.|.:.|:||:|||||:..||:.||..:|.|:|.|    |....:..:.::......|...
Human   190 EDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR----SMKAPSEPRFRLHDYVKREGRG 250

  Fly   202 SGCC 205
            :.||
Human   251 ASCC 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 79/165 (48%)
RAB26NP_055168.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Rab26 64..254 CDD:206695 82/193 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 86..101 4/14 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 119..136 12/16 (75%)
Blue background indicates that the domain is not in the aligned region.

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