DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab7b

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_006529491.1 Gene:Rab7b / 226421 MGIID:2442295 Length:257 Species:Mus musculus


Alignment Length:212 Identity:73/212 - (34%)
Similarity:113/212 - (53%) Gaps:23/212 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :||......||:::|..||||:.||.::...|:.|.|.:|:|.....:.|.||..|:|||||||.
Mouse    59 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQIWDTG 123

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEI--------ERYACENVNKLLVGNK 125
            ||||||::.|::|:|:.|.|:.:|.||.|||..:..|.:::        :.|.     .:::|||
Mouse   124 GQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPMEQSYP-----MVVLGNK 183

  Fly   126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN--ASK 188
            .||..:||....... :..:..:|:.|.|||:..||.|||..:|:....|.   ....:|  ...
Mouse   184 IDLEDRKVSQEVVHG-WCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRY---QGTAENHLIDS 244

  Fly   189 VKIDQGRPVENTKSGCC 205
            :|:..|:|    ||.||
Mouse   245 IKLSPGQP----KSRCC 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 62/172 (36%)
Rab7bXP_006529491.1 Rab 67..227 CDD:206640 61/165 (37%)

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