Protein Alignment Rab1 and Rab6a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_077249.1
• Gene: Rab6a / 19346
• MGIID: 894313
• Length: 208
• Species: Mus musculus
• Alignment Length: 195
• Identity: 73/195 - (37%)
• Similarity: 119/195 - (61%)
• Gaps: 4/195 - (2%)

  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:.:|:..|||:.|:.||..|::..:|.:|||:||..:|:.|:.:|::||:||||||||||::
Mouse    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ..||.|.:...:||||.|:..||....:|::::......:|..:|||||:||..|:.|.......
Mouse    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKID--QGRPVENTKSGC 204
            .|.:|.:.|:|||||:..||:|.|..:||.:.........:.::...:|::  |.:||  .:.||
Mouse   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPV--NEGGC 206

  Fly   205  204
            Mouse   207  206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	67/162 (41%)
Rab6a	NP_077249.1	Rab6	14..174	CDD:206654	67/159 (42%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P20340	32..50		7/17 (41%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P20340	69..88		11/18 (61%)