Protein Alignment Rab1 and Rab4a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_033029.2
• Gene: Rab4a / 19341
• MGIID: 105069
• Length: 218
• Species: Mus musculus
• Alignment Length: 175
• Identity: 80/175 - (45%)
• Similarity: 118/175 - (67%)
• Gaps: 0/175 - (0%)

  Fly     2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
            ::::..||:|||.|:||::|.||||||.:|.:..:.:....||||:|..:.|.:.||.:||||||
Mouse     4 TAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68

  Fly    67 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTK 131
            ||||||||::|.||||||.|.::|||.|.:|::|.:..||.:....|.:|:..:|.|||.||...
Mouse    69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDAD 133

  Fly   132 KVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV 176
            :.|....|:.:|.:..:.||||||.:..|||:|||..|.:|.|::
Mouse   134 REVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKI 178

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	77/164 (47%)
Rab4a	NP_033029.2	Rab4	14..174	CDD:206696	75/159 (47%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P61106	44..49		3/4 (75%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P61106	70..79		7/8 (88%)