Protein Alignment Rab1 and Rab19

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_035356.1
• Gene: Rab19 / 19331
• MGIID: 103292
• Length: 217
• Species: Mus musculus
• Alignment Length: 206
• Identity: 95/206 - (46%)
• Similarity: 134/206 - (65%)
• Gaps: 13/206 - (6%)

  Fly     9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 73
            |||||::|||||.|||:|::..|....|:||..:||||||.:|::|:|||.:|:|:|||||||||
Mouse    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERF 79

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVV---D 135
            ||||.||||.||..|:.||.|.:.:|.:|..|:.|||:|...|:..:|:||||||..|:.|   |
Mouse    80 RTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFED 144

  Fly   136 HTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEI--KNRV-----GPPSSATDNASKVKIDQ 193
            ..|.||....|.:  ||||||.:.|:::.|:.||.|:  :|.:     ......:.::|.|.:.|
Mouse   145 ACTLAEKHGLLAV--LETSAKESRNIDEVFVLMAKELIARNSLHLYGESAQQGLSQDSSPVLVAQ 207

  Fly   194 GRPVENTKSGC 204
             .|.|:|:..|
Mouse   208 -VPNESTRCTC 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	86/169 (51%)
Rab19	NP_035356.1	Rab19	15..179	CDD:133267	86/165 (52%)
		RAB	18..182	CDD:197555	84/165 (51%)
		Effector region. /evidence=ECO:0000250	46..54		4/7 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0084
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820