Protein Alignment Rab1 and Rab11b

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: XP_030105459.1
• Gene: Rab11b / 19326
• MGIID: 99425
• Length: 278
• Species: Mus musculus
• Alignment Length: 278
• Identity: 99/278 - (35%)
• Similarity: 134/278 - (48%)
• Gaps: 76/278 - (27%)

  Fly     1 MSSVNPEYDYLFK---------------------------------------------------- 13
            |.:.:.|||||||
Mouse     1 MGTRDDEYDYLFKGAPCGVQTGEVAVATGGPKPCYRNRELRVEARTSTGPIRAGSRRKPGQVEFA 65

  Fly    14 --------LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70
                    ::||||||||||.||.||..:.:.....|||||:|..|:|::||||||.||||||||
Mouse    66 RLRALVRSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 130

  Fly    71 ERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVD 135
            ||:|.|||:|||||.|.::|||.....::.||::||:|:..:|..|:..:||||||||...:.|.
Mouse   131 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVP 195

  Fly   136 HTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAE---------IKNRVGPPSSATDNASKVKI 191
            ...|..:|.:..:.|:||||..:||||:||..:..|         |.:|.....|..:|...:.:
Mouse   196 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISV 260

  Fly   192 ----DQGRPVENTKSGCC 205
                |..||   .|..||
Mouse   261 PPTTDGQRP---NKLQCC 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	86/233 (37%)
Rab11b	XP_030105459.1	Rab11_like	74..233	CDD:206660	81/158 (51%)