Protein Alignment Rab1 and rabr-4

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_507083.1
• Gene: rabr-4 / 184330
• WormBaseID: WBGene00008671
• Length: 201
• Species: Caenorhabditis elegans
• Alignment Length: 203
• Identity: 81/203 - (39%)
• Similarity: 129/203 - (63%)
• Gaps: 11/203 - (5%)

  Fly     9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 73
            |::||.::|||.|||||.|||||.|:.:...:.:|:||:|..:.:::|...::|::|||.|||.|
 Worm     4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQENF 68

  Fly    74 RTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTT 138
            |:|..:|||.|.|.::|||.|.::||.:::|||.::.::....:..:|:||||||  |.|.|.||
 Worm    69 RSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDL--KAVRDVTT 131

  Fly   139 --AAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTK 201
              ...:|.:.|:.|:|||||:..:||:||:..|.||..::.......|:..|.||.   .:..::
 Worm   132 EEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYKKLKLGVIEDDDVKKKKIG---IILRSR 193

  Fly   202 SG----CC 205
            ||    ||
 Worm   194 SGKEKKCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	72/166 (43%)
rabr-4	NP_507083.1	P-loop containing Nucleoside Triphosphate Hydrolases	5..170	CDD:476819	72/166 (43%)