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Protein Alignment Rab1 and F08G12.1
DIOPT Version :9
Sequence 1: | NP_732610.1 |
Gene: | Rab1 / 42524 |
FlyBaseID: | FBgn0285937 |
Length: | 205 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_509888.1 |
Gene: | F08G12.1 / 181320 |
WormBaseID: | WBGene00008585 |
Length: | 635 |
Species: | Caenorhabditis elegans |
Alignment Length: | 160 |
Identity: | 36/160 - (22%) |
Similarity: | 64/160 - (40%) |
Gaps: | 56/160 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYIST-----IGVDFKIRTIELDGKTIKLQIW---- 65
|..|:::.||..|||:||..|....::.|.|::| ..:::..|..: ..:|:.:|
Worm 42 YNLKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATD---DVVKVDVWDIVD 103
Fly 66 ----------------------------DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNV 102
|||...||..: |:|.:|:|.|:|.|
Worm 104 QSTKKRVKDDKLKLANNGMDKNDGLDYEDTACDARFVDV----YKGTNGVIFVFDIT-------- 156
Fly 103 KQWL-EEIERYACENVNK---LLVGNKSDL 128
|.|. |.:::...:..|| |::.|:.|:
Worm 157 KTWTWEYVQKEIVKVPNKIPVLVLANRRDM 186
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0084 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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