Protein Alignment Rab1 and rab-18

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_741092.1
• Gene: rab-18 / 175272
• WormBaseID: WBGene00004277
• Length: 203
• Species: Caenorhabditis elegans
• Alignment Length: 184
• Identity: 76/184 - (41%)
• Similarity: 114/184 - (61%)
• Gaps: 14/184 - (7%)

  Fly    13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTIT 77
            |:|:||:||||||.|:|||.||.:.....:||||||::.::.:||..:||.||||||||||||:|
 Worm    13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLT 77

  Fly    78 SSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYAC-ENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            .||||||.|:|.|||.|.:.||..:..|::|::.|.. :|:.|::|.||.|: ..:||......:
 Worm    78 PSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM-PNRVVTREEGLK 141

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEI------------KNRVGPPSSAT 183
            :|.:....|:|.|||:...|:..|..:..:|            ..|:|.|:.::
 Worm   142 FAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDNDRPSFRLGQPTGSS 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	73/174 (42%)
rab-18	NP_741092.1	Rab18	12..172	CDD:206656	72/159 (45%)