Protein Alignment Rab1 and Rab3d

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: XP_006242655.1
• Gene: Rab3d / 140665
• RGDID: 620924
• Length: 239
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 90/206 - (43%)
• Similarity: 130/206 - (63%)
• Gaps: 4/206 - (1%)

  Fly     3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
            :.:..:||:|||||||:|.|||:..|.|:|||::|.:::||:|:|||::|:....|.||||||||
  Rat    34 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDT 98

  Fly    68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKK 132
            |||||:||||::|||||.|.:::||..:||||..|:.|..:|:.|:.:|...:|||||.||..::
  Rat    99 AGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDER 163

  Fly   133 VVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG----PPSSATDNASKVKIDQ 193
            ||........|..||..|.|.|||...||:|.|..:...|.:::.    |.||...|.....:..
  Rat   164 VVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGPALGD 228

  Fly   194 GRPVENTKSGC 204
            ..|.:.:..||
  Rat   229 TPPPQPSSCGC 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	82/164 (50%)
Rab3d	XP_006242655.1	Rab3	42..206	CDD:206657	81/163 (50%)