DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab30

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_061496808.1 Gene:Rab30 / 1281369 VectorBaseID:AGAMI1_004366 Length:237 Species:Anopheles gambiae


Alignment Length:194 Identity:90/194 - (46%)
Similarity:124/194 - (63%) Gaps:19/194 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
            :|.:|||::|:|::||||:||:.||....:.....:||||||.|:|:|:|.:.||||||||||||
Mosquito     3 DYKFLFKVVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVDNQKIKLQIWDTAGQE 67

  Fly    72 RFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDH 136
            |||:||.||||.|..:|:|||.:.|.:|:.:..||.||:.:|...|.|:|||||:|...:: :..
Mosquito    68 RFRSITQSYYRSASALILVYDISCQPTFDCLPDWLREIQEHANSKVLKILVGNKTDRDDRE-IPQ 131

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENT 200
            ...||:|.|.|:.|||||||.|.|||:.|..:||                  |.|:|.|..|.|
Mosquito   132 EVGAEFAKQHGMYFLETSAKQADNVERLFYDIAA------------------VLIEQARTKEFT 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 83/164 (51%)
Rab30XP_061496808.1 None

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