DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab5

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_061514268.1 Gene:Rab5 / 1278055 VectorBaseID:AGAMI1_014053 Length:216 Species:Anopheles gambiae


Alignment Length:200 Identity:86/200 - (43%)
Similarity:119/200 - (59%) Gaps:18/200 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
            |||:|:|:|.||||.|:|||....:.|...||||..|..:|:.:|..|:|.:|||||||||:.::
Mosquito    25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQERYHSL 89

  Fly    77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
            ...|||||...|||||..:.:||...|.|::|::|.|..|:...|.|||:||...:|||:..|.:
Mosquito    90 APMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQ 154

  Fly   142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEI-KNR-VGPPSSATDNASKVKIDQGRPVEN----T 200
            ||...|:.|:|||||:|.||...|:.:|.:: ||. .||..:.            ||.:|    .
Mosquito   155 YADDNGLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQNI------------RPTQNETNRQ 207

  Fly   201 KSGCC 205
            .||||
Mosquito   208 NSGCC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 76/163 (47%)
Rab5XP_061514268.1 None

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