DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and Rab23

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:XP_061512129.1 Gene:Rab23 / 1271192 VectorBaseID:AGAMI1_000298 Length:223 Species:Anopheles gambiae


Alignment Length:196 Identity:69/196 - (35%)
Similarity:106/196 - (54%) Gaps:1/196 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
            |.:...|::::|:.||||:.::.|:....||:.|..||||||..|.||:||:.|::.:|||||||
Mosquito     5 ELEIALKVIVVGNGGVGKTSMVQRYCKGIYTKDYKKTIGVDFLERQIEIDGEDIRIMLWDTAGQE 69

  Fly    72 RFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDH 136
            .|..||.:|||||...::.:..||:.||..:::|..::|. .|..:..:||.||.||..:.||..
Mosquito    70 EFDAITKAYYRGAQACVLTFSTTDRASFEAIREWKRKVEN-ECSEIPTVLVQNKIDLMDQAVVSF 133

  Fly   137 TTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTK 201
            ..|...|..||...:.||.|...||...|..:|.:....:....|.:...|:..|....|...:|
Mosquito   134 EEAEALAYSLGCRLIRTSVKEDVNVATVFRYLATKCHQMMKQQYSQSAPISQPTISAFSPTFQSK 198

  Fly   202 S 202
            :
Mosquito   199 A 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 63/164 (38%)
Rab23XP_061512129.1 None

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