Protein Alignment Rab1 and Rab8a

DIOPT Version :10

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_446450.2
• Gene: Rab8a / 117103
• RGDID: 621144
• Length: 207
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 104/191 - (54%)
• Similarity: 142/191 - (74%)
• Gaps: 5/191 - (2%)

  Fly     8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
            |||||||||||||||||:|:|.||::|.:..::|||||:||||||||||||.|||||||||||||
  Rat     5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 69

  Fly    73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
            |||||::|||||.||::|||.|:::||:|::.|:..||.:|..:|.|:::|||.|:..|:.|...
  Rat    70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKE 134

  Fly   138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRV-----GPPSSATDNASKVKIDQ 193
            ...:.|...||.|:|||||:..|||.||.|:|.:||.::     |.....:.:..|:.::|
  Rat   135 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQ 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	99/164 (60%)
Rab8a	NP_446450.2	Rab8_Rab10_Rab13_like	6..172	CDD:206659	100/165 (61%)
		Switch 1. /evidence=ECO:0000250|UniProtKB:P62820	31..45		6/13 (46%)
		Switch 2. /evidence=ECO:0000250|UniProtKB:P62820	63..80		14/16 (88%)