Protein Alignment Rab1 and Rab1b

DIOPT Version :9

• Sequence 1: NP_732610.1
• Gene: Rab1 / 42524
• FlyBaseID: FBgn0285937
• Length: 205
• Species: Drosophila melanogaster
• Sequence 2: NP_001103449.1
• Gene: Rab1b / 100126191
• RGDID: 1642882
• Length: 201
• Species: Rattus norvegicus
• Alignment Length: 202
• Identity: 167/202 - (82%)
• Similarity: 182/202 - (90%)
• Gaps: 1/202 - (0%)

  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 65

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||||||||||||||||||||||.|||||:.||||||:||:|||.|||||||||||||||||||
  Rat    66 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKV 130

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVE 198
            ||:|||.|:|..||:||||||||:||||||||||||||||.|:||.:::......:||| ..||:
  Rat   131 VDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID-STPVK 194

  Fly   199 NTKSGCC 205
            :...|||
  Rat   195 SASGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab1	NP_732610.1	Rab1_Ypt1	10..175	CDD:206661	151/164 (92%)
Rab1b	NP_001103449.1	Rab1_Ypt1	7..172	CDD:206661	151/164 (92%)
		Effector region. /evidence=ECO:0000255	37..45		7/7 (100%)
		Switch 2 region, required for interaction with REP1/CHM. /evidence=ECO:0000250|UniProtKB:Q9H0U4	64..83		18/18 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	173..201		8/28 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	297	1.000	Domainoid score	I1406
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	341	1.000	Inparanoid score	I2277
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1149105at2759
OrthoFinder	1	1.000	-	-		FOG0001193
OrthoInspector	1	1.000	-	-		otm45140
orthoMCL	1	0.900	-	-		OOG6_101123
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X737
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	10.970