DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1 and zgc:171927

DIOPT Version :10

Sequence 1:NP_732610.1 Gene:Rab1 / 42524 FlyBaseID:FBgn0285937 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001096112.1 Gene:zgc:171927 / 100124616 ZFINID:ZDB-GENE-070822-21 Length:210 Species:Danio rerio


Alignment Length:210 Identity:152/210 - (72%)
Similarity:174/210 - (82%) Gaps:8/210 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
            :||||||||||||||||||||||||||||||||||||||||||||||||||::|||:||||||||
Zfish     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTA 65

  Fly    69 GQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKV 133
            ||||||||||||||||||||:|||.|:||||||||||||||:|||||||:||||||||||::|||
Zfish    66 GQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSDLSSKKV 130

  Fly   134 VDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATD--------NASKVK 190
            ||.|||.|:...|.||.||||||:|.|||:||:.||:||:.|:|..|...:        |::.:.
Zfish   131 VDFTTAMEFTESLKIPLLETSAKNANNVEKAFLAMASEIQKRIGADSVQNETVKIGSKINSAPLW 195

  Fly   191 IDQGRPVENTKSGCC 205
            ....:.|....|.||
Zfish   196 PGAEKSVAEEVSSCC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1NP_732610.1 Rab1_Ypt1 10..175 CDD:206661 139/164 (85%)
zgc:171927NP_001096112.1 Rab1_Ypt1 7..172 CDD:206661 139/164 (85%)

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