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Protein Alignment Rab1 and rab3b
DIOPT Version :9
Sequence 1: | NP_732610.1 |
Gene: | Rab1 / 42524 |
FlyBaseID: | FBgn0285937 |
Length: | 205 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001093746.1 |
Gene: | rab3b / 100101786 |
XenbaseID: | XB-GENE-483427 |
Length: | 217 |
Species: | Xenopus tropicalis |
Alignment Length: | 193 |
Identity: | 85/193 - (44%) |
Similarity: | 125/193 - (64%) |
Gaps: | 11/193 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
:||:||||:||:|.|||:..|.|:||||:|.:::||:|:|||::|:..:.|.:||||||||||||
Frog 19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTSAFVSTVGIDFKVKTVYRNDKRVKLQIWDTAGQER 83
Fly 73 FRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHT 137
:||||::|||||.|.|::||.|.:.|:|.|:.|..:|:.|:.:|...:|||||.|:..::|:...
Frog 84 YRTITTAYYRGAMGFILMYDITSESSYNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIAPE 148
Fly 138 TAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG-------PPSSA----TDNASKV 189
.....|.|||..|.|.|||....|:|.|..:...|.:::. ||... ||.|..:
Frog 149 KGKHLADQLGFEFFEASAKENIQVKQVFERLVDIICDKMSESLDTDQPPGGKNLRFTDTAPPI 211
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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