DRSC/TRiP Functional Genomics Resources

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Protein Alignment ETHR and ghsra

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001139744.1 Gene:ghsra / 795753 ZFINID:ZDB-GENE-070912-238 Length:360 Species:Danio rerio


Alignment Length:343 Identity:109/343 - (31%)
Similarity:171/343 - (49%) Gaps:44/343 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PSYIRTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVCTPTVLVE 70
            |..:.|.....|::...:||.||:|..:|:.|.||||.:||::|::::.:|||:.| |.|..|..
Zfish    33 PIPVLTGVTVTCVLFFFVGVTGNLMTILVVTKYKDMRTTTNLYLSSMAFSDLLIFL-CMPLDLYR 96

  Fly    71 V-NTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRAILICV 134
            : ..||  |..|:.:||...||.....::::|.|.|:|.|||:|||.||:|..|.||||...:.:
Zfish    97 IWRYRP--WNFGNILCKLFQFVSECCTYSTILNITALSVERYFAICFPLRAKVVVTKGRVRGVIL 159

  Fly   135 LAWGIAALFTSPIL-------------W-VAEYKLAEYIDGSSVAVCLTQAISDWTLAFFLMTIS 185
            :.|.::.....|:.             | ..|.|..||            ||....|...:...|
Zfish   160 VLWIVSFFSAGPVFVLVGVEHENGTNSWDTNECKATEY------------AIRSGLLTIMVWVSS 212

  Fly   186 VFFVVPFVTLVVLYGIIARNLVSNRAAMLRARPTKPELSLKARKQVVLMLGAVVLSFFVCLLPFR 250
            :||.:|...|.|||.:|.|.|...:...:....:..:   |:.:|.|.||..||.:|.:|.|||.
Zfish   213 IFFFLPVFCLTVLYSLIGRKLWKRKRETIGENASSRD---KSNRQTVKMLAVVVFAFVLCWLPFH 274

  Fly   251 VLTLWIILSTDQTLHDLGLVRYY-SLLYFCRIMLYLNSAMNPILYNLMSTKFRRGFKRLCQDAGR 314
            |....|..||:.....:.::.:| :|:.|  ::.||::|:||||||:||.|:|..   .|:    
Zfish   275 VGRYLISKSTEMGSPVMSIISHYCNLISF--VLFYLSAAINPILYNIMSKKYRMA---ACK---- 330

  Fly   315 LLLELVTLGRRKEDSSRG 332
             |..|..:.||....::|
Zfish   331 -LFGLRNIPRRSTSVAKG 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 48/125 (38%)
7tm_1 27..294 CDD:278431 91/282 (32%)
7tm_4 <102..307 CDD:304433 70/219 (32%)
ghsraNP_001139744.1 7tm_4 49..333 CDD:304433 102/311 (33%)
7tm_1 54..317 CDD:278431 91/282 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 145 1.000 Domainoid score I4519
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H57161
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

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