DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETHR and trhrb

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001108160.1 Gene:trhrb / 569382 ZFINID:ZDB-GENE-060503-382 Length:399 Species:Danio rerio


Alignment Length:373 Identity:114/373 - (30%)
Similarity:189/373 - (50%) Gaps:46/373 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVC-TPTVLVEVNT 73
            :..::....:|..||:||||||.:|::.||.||..||.:|.:|::|||:||:.. .|::   .::
Zfish    22 KAISVLIVFLICALGIVGNVMVILVVLTTKHMRTPTNGYLVSLAVADLMVLVAAGLPSI---ADS 83

  Fly    74 RPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRAILICVLAWG 138
            ...:||.||..|..:.:.:....:||..:|.|.:.|||.|||.|:||.::||..||..|.:..|.
Zfish    84 LFGSWVFGHAGCLCITYFQYLGINASSCSITAFTIERYIAICHPIKAQFLCTLSRAKKIIIGVWV 148

  Fly   139 IAALFTSPILWVAEYKLAEYIDGSSVAVCLTQAISDWTLAFFLMTISVFFVVPFVTLVVLYGIIA 203
            ..:|:.....::::.:...|.| :::..|..:...:..|..:.....:|||:|.....||||:||
Zfish   149 FTSLYCVMWFYLSDVQQVLYKD-ATIITCAYKVSRNLYLPIYFFDFGIFFVLPLTLATVLYGLIA 212

  Fly   204 RNLVSN------------RAAMLRARPTKPELSLK-------ARKQVVLMLGAVVLSFFVCLLPF 249
            |.|..|            .....:|:..|.:.|.:       :|:||..||..||:.|.|..:|:
Zfish   213 RILFLNPLPSDTKEEKNGHGNFSKAKRNKLKSSSRCSSTTAASRRQVTKMLAVVVILFAVLWMPY 277

  Fly   250 RVLTLWIILSTDQTLHDLGLVRYYSLLYFCRIMLYLNSAMNPILYNLMSTKFRRGFKRLCQDAGR 314
            |.|.:     .:..|.|..|..::  |.|||..:|||||:||::||.||.|||..|:|||: .||
Zfish   278 RTLVV-----VNSFLQDAYLDTWF--LLFCRTCVYLNSAINPLIYNAMSQKFRAAFRRLCR-CGR 334

  Fly   315 LLLELVTLGRRKEDSSRGRRGTLSLGMGTNTNTNTNSSNATGATSSSI 362
                          :::..:...|:.:..:....|::..:||..|:.|
Zfish   335 --------------NAQANKAAYSVALTYSVAKETSTVESTGHFSTEI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 48/125 (38%)
7tm_1 27..294 CDD:278431 91/286 (32%)
7tm_4 <102..307 CDD:304433 72/223 (32%)
trhrbNP_001108160.1 7tm_4 30..333 CDD:304433 106/314 (34%)
7tm_1 39..315 CDD:278431 91/286 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFHW
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I4086
OMA 1 1.010 - - QHG46032
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002547
OrthoInspector 1 1.000 - - otm24868
orthoMCL 1 0.900 - - OOG6_104289
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4203
SonicParanoid 1 1.000 - - X1670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.800

Return to query results.
Submit another query.