DRSC/TRiP Functional Genomics Resources

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Protein Alignment ETHR and CapaR

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_996140.1 Gene:CapaR / 40393 FlyBaseID:FBgn0037100 Length:477 Species:Drosophila melanogaster


Alignment Length:449 Identity:117/449 - (26%)
Similarity:192/449 - (42%) Gaps:95/449 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PQ-IPSYIRTTAMFFCIV---IMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVC 63
            || :|.|   .|:...|:   |.:.|||||::|.|||::...|..:||.:|.:|:::|||.||..
  Fly    60 PQTLPLY---KAVLITIIFGGIFITGVVGNLLVCIVIIRHSAMHTATNYYLFSLAVSDLLYLLFG 121

  Fly    64 TPT-VLVEVNTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKG 127
            .|| |.:..:..|:  :.|...||...|:.....:.||.||:|.|.||:.|||.||....:....
  Fly   122 LPTEVFLYWHQYPD--LFGMPFCKIRAFISEACTYVSVFTIVAFSMERFLAICHPLHLYAMVGFK 184

  Fly   128 RAILICVLAWGIAALFTSPILWVAEYKLAEY-IDGSSV---AVCLTQAISDWTLAFFLMTISVFF 188
            |||.|....|.::.:...|...:::.:...| :|.|.:   |.|.........:..|.::..:||
  Fly   185 RAIRIITALWIVSFISAIPFGLLSDIQYLNYPLDHSRIEESAFCSMSPKIVNEIPVFEVSFCIFF 249

  Fly   189 VVPFVTLVVLYGIIARNLVSNRAAMLRARPTKPELSLK-------------ARKQVVLMLGAVVL 240
            |:|.:.:::|||        ...|.:|:| |..:|.::             .:|.|:.||.|||:
  Fly   250 VIPMILIILLYG--------RMGAKIRSR-TNQKLGVQQGTNNRETRNSQMRKKTVIRMLAAVVI 305

  Fly   241 SFFVCLLPFRVLTLWII--------LSTDQTLHDLGLVRYYSLLYFCRIMLYLNSAMNPILYNLM 297
            :||||..||.:..|..:        |..::.|..:....|           |::..:|||:|::|
  Fly   306 TFFVCWFPFHLQRLIFLYAKNMDNYLDINEALFSIAGFAY-----------YVSCTVNPIVYSVM 359

  Fly   298 STKFRRGFKRLCQDAGRLLLELVTLGRRKE-----------------------------DSSRGR 333
            |.::|..|:.|.  .|:.:......|..::                             |||...
  Fly   360 SRRYRVAFRELL--CGKAVGAYYNSGFARDHSSFRESSAYDRVHSVHVRASQHPNKFETDSSSAN 422

  Fly   334 R----GTLSLGMGTNTNTNTNSSNATGATSSSILSRSSNRRCSEDISRTRLKIEMQMPC 388
            |    .|.||.:..|.:     |.....|...|:..:|:..|.|......:.||.:..|
  Fly   423 RVLIKKTYSLPLPKNAD-----STVLSTTDIVIVLENSHTVCEEPKVENDIWIENEETC 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 47/128 (37%)
7tm_1 27..294 CDD:278431 82/292 (28%)
7tm_4 <102..307 CDD:304433 61/229 (27%)
CapaRNP_996140.1 7tm_4 85..374 CDD:304433 88/312 (28%)
7tm_1 85..356 CDD:278431 82/292 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445871
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24243
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
43.970

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