DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETHR and Cckbr

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_037297.2 Gene:Cckbr / 25706 RGDID:2290 Length:452 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433
7tm_1 27..294 CDD:278431
7tm_4 <102..307 CDD:304433
CckbrNP_037297.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
7tm_GPCRs 55..406 CDD:421689
TM helix 1 56..82 CDD:410628
TM helix 2 89..115 CDD:410628
TM helix 3 127..157 CDD:410628
TM helix 4 170..191 CDD:410628
TM helix 5 215..244 CDD:410628
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..286
TM helix 6 331..361 CDD:410628
TM helix 7 374..399 CDD:410628
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 421..452
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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