DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETHR and Trhr

DIOPT Version :10

Sequence 1:NP_650960.2 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_038724.1 Gene:Trhr / 22045 MGIID:98824 Length:393 Species:Mus musculus


Alignment Length:348 Identity:111/348 - (31%)
Similarity:170/348 - (48%) Gaps:85/348 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVC-TPTVLVEVNT 73
            :...:...::|..||:|||:||.:|:::||.||..||.:|.:|::|||:||:.. .|.:...:. 
Mouse    25 QVVTILLVVIICGLGIVGNIMVVLVVMRTKHMRTPTNCYLVSLAVADLMVLVAAGLPNITDSIY- 88

  Fly    74 RPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRAILICVLAWG 138
              .:||.|:..|..:.:::....:||..:|.|.:.|||.|||.|:||.::||..||..|.:..|.
Mouse    89 --GSWVYGYVGCLCITYLQYLGINASSCSITAFTIERYIAICHPIKAQFLCTFSRAKKIIIFVWA 151

  Fly   139 IAALFTSPILW-------VAEYKLAEYIDGSSVAVCLTQAIS-DWTLAFFLMTISVFFVVPFVTL 195
            ..:::.  :||       ::.||       ::|.|.....|| ::....:||...||:|||.:..
Mouse   152 FTSIYC--MLWFFLLDLNISTYK-------NAVVVSCGYKISRNYYSPIYLMDFGVFYVVPMILA 207

  Fly   196 VVLYGIIARNLVSNRAAMLRARPTKPE----------------LSLKA-----------RKQVVL 233
            .||||.|||.|      .|...|:.|:                |:|.|           ||||..
Mouse   208 TVLYGFIARIL------FLNPIPSDPKENSKMWKNDSIHQNKNLNLNATNRCFNSTVSSRKQVTK 266

  Fly   234 MLGAVVLSFFVCLLPFRVLTL------------WIILSTDQTLHDLGLVRYYSLLYFCRIMLYLN 286
            ||..||:.|.:..:|:|.|.:            |.:|                   ||||.:|||
Mouse   267 MLAVVVILFALLWMPYRTLVVVNSFLSSPFQENWFLL-------------------FCRICIYLN 312

  Fly   287 SAMNPILYNLMSTKFRRGFKRLC 309
            ||:||::|||||.|||..|::||
Mouse   313 SAINPVIYNLMSQKFRAAFRKLC 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_650960.2 7tmA_ETH-R 11..305 CDD:320128 108/341 (32%)
TM helix 1 12..38 CDD:320128 9/25 (36%)
TM helix 2 45..70 CDD:320128 10/25 (40%)
TM helix 3 85..115 CDD:320128 9/29 (31%)
TM helix 4 128..149 CDD:320128 4/20 (20%)
TM helix 5 176..205 CDD:320128 13/28 (46%)
TM helix 6 226..256 CDD:320128 13/52 (25%)
TM helix 7 273..298 CDD:320128 14/24 (58%)
TrhrNP_038724.1 7tmA_TRH-R 26..331 CDD:320126 108/341 (32%)
TM helix 1 27..53 CDD:320126 9/25 (36%)
TM helix 2 60..85 CDD:320126 10/24 (42%)
TM helix 3 98..128 CDD:320126 9/29 (31%)
TM helix 4 141..162 CDD:320126 6/22 (27%)
TM helix 5 188..217 CDD:320126 13/28 (46%)
TM helix 6 259..289 CDD:320126 12/29 (41%)
TM helix 7 299..324 CDD:320126 16/43 (37%)

Return to query results.
Submit another query.