DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ETHR and Ghsr

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_017175002.1 Gene:Ghsr / 208188 MGIID:2441906 Length:427 Species:Mus musculus


Alignment Length:361 Identity:118/361 - (32%)
Similarity:184/361 - (50%) Gaps:41/361 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLPQIPSYIRTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVCTP 65
            :||..|:.:.......|:.:.::|:.||::..:|:.:.:::|.:||::|::::.:|||:.| |.|
Mouse    96 LLPLFPAPLLAGVTATCVALFVVGISGNLLTMLVVSRFRELRTTTNLYLSSMAFSDLLIFL-CMP 159

  Fly    66 TVLVEV-NTRPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRA 129
            ..||.: ..||  |..|..:||...||..:..:|:||||.|:|.|||:|||.||:|..|.||||.
Mouse   160 LDLVRLWQYRP--WNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRV 222

  Fly   130 ILICVLAWGIAALFTSPILWVAEYKLAEYIDGSSVAVCLTQ--AISDWTLAFFLMTISVFFVVPF 192
            .|:.::.|.:|.....||..:...:.....|......|...  |:....|...:...||||.:|.
Mouse   223 KLVILVIWAVAFCSAGPIFVLVGVEHENGTDPRDTNECRATEFAVRSGLLTVMVWVSSVFFFLPV 287

  Fly   193 VTLVVLYGIIARNLVSNR--AAMLRARPTKPELSLKARKQVVLMLGAVVLSFFVCLLPFRVLTLW 255
            ..|.|||.:|.|.|...|  ||:      ...|..:..||.|.||..||.:|.:|.|||.|....
Mouse   288 FCLTVLYSLIGRKLWRRRGDAAV------GSSLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYL 346

  Fly   256 IILSTDQ-TLHDLGLVRYYSLLYFCRIMLYLNSAMNPILYNLMSTKFR------RGFKRLCQDAG 313
            ...|.:. :|....:.:|.:|:.|  ::.||::|:||||||:||.|:|      .||:...|   
Mouse   347 FSKSFEPGSLEIAQISQYCNLVSF--VLFYLSAAINPILYNIMSKKYRVAVFKLLGFESFSQ--- 406

  Fly   314 RLLLELVTLGRRKEDSSRGRRGTLSLGMGTNTNTNT 349
               .:|.||   |::|||.         .|.::.||
Mouse   407 ---RKLSTL---KDESSRA---------WTKSSINT 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 48/125 (38%)
7tm_1 27..294 CDD:278431 93/272 (34%)
7tm_4 <102..307 CDD:304433 76/215 (35%)
GhsrXP_017175002.1 7tmA_GHSR 107..395 CDD:320259 102/298 (34%)
TM helix 1 108..132 CDD:320259 5/23 (22%)
TM helix 2 141..162 CDD:320259 8/21 (38%)
TM helix 3 179..201 CDD:320259 9/21 (43%)
TM helix 4 224..240 CDD:320259 3/15 (20%)
TM helix 5 272..295 CDD:320259 9/22 (41%)
TM helix 6 320..345 CDD:320259 13/24 (54%)
TM helix 7 363..388 CDD:320259 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H57161
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5416
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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