DRSC/TRiP Functional Genomics Resources

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Protein Alignment ETHR and trhr2

DIOPT Version :9

Sequence 1:NP_001287439.1 Gene:ETHR / 42523 FlyBaseID:FBgn0038874 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_002936137.2 Gene:trhr2 / 100498158 XenbaseID:XB-GENE-1018399 Length:400 Species:Xenopus tropicalis


Alignment Length:408 Identity:118/408 - (28%)
Similarity:180/408 - (44%) Gaps:106/408 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RTTAMFFCIVIMLLGVVGNVMVPIVIVKTKDMRNSTNIFLTNLSIADLLVLLVC-TPTVLVEVNT 73
            :..::|..:.|..:|::||:||.:|:..|:|||..||.:|.:|::|||:||:.. .|.|   .::
 Frog    28 KAISVFLVLFICGIGIIGNIMVVLVVFTTRDMRTPTNCYLVSLAVADLMVLVAAGLPNV---SDS 89

  Fly    74 RPETWVLGHEMCKAVPFVELTVAHASVLTILAISFERYYAICEPLKAGYVCTKGRAILICVLAWG 138
            ...|||.||..|..:.:.:....:||..:|.|.:.|||.|||.|::|..|||..||..|..:.| 
 Frog    90 LAGTWVYGHAGCLGITYFQYLGINASSCSITAFTVERYIAICHPMRAQTVCTVSRAKRIIAIVW- 153

  Fly   139 IAALFTSPILWVAEYKLAEYIDGSSVAVCLTQAISDWTLAFFLMTISVFFVVPFVTLVVLYGIIA 203
               :|||.......:.:..:::.|....|..:...:..|..:|...::|:|.|.:...:|||:|.
 Frog   154 ---IFTSIYCMFWFFLVDIHVNKSQQVECGYKVSRNLYLPIYLADFAIFYVTPLLVATILYGLIG 215

  Fly   204 R---------------------------------NLVSNRAAMLRARPTKPELSLKARKQVVLML 235
            |                                 |..|||        .|.:.:|.:||||..||
 Frog   216 RILFLSPIPQHPESTTERWREKSSKEKTESETEGNKPSNR--------LKTKGALSSRKQVTKML 272

  Fly   236 GAVVLSFFVCLLPFRVLTL------------WIILSTDQTLHDLGLVRYYSLLYFCRIMLYLNSA 288
            ..||:.|.:..:|:|.|.|            |.:|                   ||||.:|.|||
 Frog   273 AVVVVLFALLWMPYRTLVLVNSFMDKPYLDPWFLL-------------------FCRICVYANSA 318

  Fly   289 MNPILYNLMSTKFRRGFKRLCQ---DAGRLLLELVTL------------GRRKEDSSRGRRGTLS 338
            :||::|||||.|||..|||||:   :|.|..:.:.|.            |.:||..|..:     
 Frog   319 INPVIYNLMSQKFRTAFKRLCKCGHEAQRRSIYMTTTSYSMVKDGVNTGGEKKEKQSLEK----- 378

  Fly   339 LGMGTNTNTNTNSSNATG 356
                  ||.....:|..|
 Frog   379 ------TNIIAKQTNKAG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ETHRNP_001287439.1 7tm_4 18..>143 CDD:304433 47/125 (38%)
7tm_1 27..294 CDD:278431 91/312 (29%)
7tm_4 <102..307 CDD:304433 72/249 (29%)
trhr2XP_002936137.2 7tmA_TRH-R 30..335 CDD:320126 102/338 (30%)
TM helix 1 31..55 CDD:320126 8/23 (35%)
TM helix 2 64..87 CDD:320126 10/25 (40%)
TM helix 3 102..124 CDD:320126 4/21 (19%)
TM helix 4 147..163 CDD:320126 5/19 (26%)
TM helix 5 189..212 CDD:320126 6/22 (27%)
TM helix 6 269..291 CDD:320126 8/21 (38%)
TM helix 7 303..328 CDD:320126 15/43 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I3999
OMA 1 1.010 - - QHG46032
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002547
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

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