DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5892 and CG12990

DIOPT Version :10

Sequence 1:NP_650959.2 Gene:CG5892 / 42522 FlyBaseID:FBgn0038873 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_573233.1 Gene:CG12990 / 32747 FlyBaseID:FBgn0030859 Length:663 Species:Drosophila melanogaster


Alignment Length:731 Identity:152/731 - (20%)
Similarity:257/731 - (35%) Gaps:206/731 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LDDLVPEGRLPTVSDLQCYADFAQLTAGLASGSLWAYRMIDSWGSIPSGILKGHLKDLGHYDECI 122
            |.::||:....|:|  :|.....:|.........||.:.||:.|...:..:.|....||:...|.
  Fly    29 LIEMVPQRENTTLS--KCEEQLLELRRAWQDHQSWALKAIDASGEGYANFMMGQRAWLGNRFTCR 91

  Fly   123 AIEQSAASGSTLLGKYCLASL-PLQ--------------QLLGNVGRMMNVQTAVCFPASCSATN 172
            |:.:......|:..:..|..: |:|              ||...:.....:...:|.||||....
  Fly    92 AVNEPMLQDMTIKNQRLLREMSPIQFHYLVAYIESNSPWQLEVTIKANPLLHIGLCLPASCDVPE 156

  Fly   173 MDTLLRRVLKQLVGLELNSNQNLVSENSCKTSERDA--------------YDGGAIAAIVILSVF 223
            ::.|:|:              ::..|.|....:.||              :|.||:.   |..|.
  Fly   157 VEQLIRK--------------SMAKEESFHCWDMDAKLAYAKKPELKTNFFDSGAVQ---IFFVV 204

  Fly   224 GGAVIISTFYDYFLCADQ--NKLPAILKVFSARANSRSLFRITTKP-NPN-VIECLHGLR----- 279
            .|..::.|     |.|..  .|...||..|....|    :|:..|| ||: ....::|||     
  Fly   205 LGVTLLLT-----LAATSGLGKYSRILACFDFADN----WRLAWKPVNPSQENRPVNGLRVLTAF 260

  Fly   280 ---GMSLIWV-CFGHDFIISMTSPNINLYDVYTWAKTPFKDIIQEGVFAVDSFFFISGLLVAMVA 340
               |:.:||. .|..|..:.|.....::...:|:..|           .|:.||.:||.|..:..
  Fly   261 SLIGVHVIWYKYFSVDPSVEMLGKLSSMTMRHTYWPT-----------MVEIFFVVSGYLTVLNF 314

  Fly   341 LRSMEKAK--------GKLNIPLM-YLHRYLRLTPIVAVSILLYWKLLPHLGDGPLYGNWNFDSY 396
            :|..:..|        |.:...|. ::|||.||.|:..|.:|:...::               .|
  Fly   315 IRDEQLQKDIASDGILGNMRRYLREFIHRYCRLAPLQFVIVLMGVVVI---------------EY 364

  Fly   397 DR--------------CEGNWYWTLLYVQN-YATDSECLAHTWYLAIDTQLYIIAPILLII---- 442
            .|              |..|....:.::|| :.....|.:.||.|..|.||::.|.:||.:    
  Fly   365 QRQVSVMQITDPQDELCRLNAVRNVFFIQNLFPIQFMCGSWTWSLGCDMQLHMTAMLLLFMHTKH 429

  Fly   443 --VYKWGKKGAAVVLLLLLGLTAYLFSIIVINNYSLISGGGGGGPDDYSEDLDHYTHN--RASGW 503
              :.||       ::.||:.::| ||||:.:.    ::..|....:.|..:...|...  |...:
  Fly   430 PNMVKW-------IVRLLVVISA-LFSIVFME----VNEVGANFEEMYHTNEWSYMSPLIRMLAY 482

  Fly   504 LVGFLFGYFLHTIRGKAIKLSRPAVWI--GWITCLAFL-----------------FTCIFAMYPY 549
            ::|..:.:|.....|....|..|..||  |.|.|:.:|                 |..:..:. .
  Fly   483 IIGGSYAFFQVKGTGTPFDLVMPNWWIRLGAIACIGWLARQVTMDQLPAISIILSFMVVLRIL-V 546

  Fly   550 GTGKSK-----TLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGYGGLANSFLTSPLWQPLSKLSF 609
            .|..|.     |.|..::::    :...|.|.|                  |.|...|.:||.::
  Fly   547 STAASHLIICGTKPDNSDSY----APTRWLLAL------------------LQSEQVQRISKFTY 589

  Fly   610 CAYM---------GHLFIQNLNAGRTRVNTYFSNYDIMLRFWQDFGFTVLLAYVMYILIEAPCGG 665
            ..|:         .|.|...:....|.:.....:..::...|         |.||.:|.|.|...
  Fly   590 AIYLLNPIVIMYVYHSFSNEVYPDNTMMIMLAISCSVVCYLW---------AIVMTVLFEIPFNR 645

  Fly   666 LESLILPNRRPAPQPK 681
            |.|::: |.|.:|..|
  Fly   646 LTSVMI-NSRSSPAKK 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5892NP_650959.2 NRF 90..203 CDD:214781 25/127 (20%)
OafA 275..677 CDD:441440 97/475 (20%)
CG12990NP_573233.1 NRF 44..161 CDD:466307 23/116 (20%)
OafA 241..658 CDD:441440 100/487 (21%)

Return to query results.
Submit another query.