DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5892 and ndg-4

DIOPT Version :10

Sequence 1:NP_650959.2 Gene:CG5892 / 42522 FlyBaseID:FBgn0038873 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:669 Identity:143/669 - (21%)
Similarity:260/669 - (38%) Gaps:192/669 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 WAYRMIDSWGSIPSGILKGHLKDLGHYDECIAIEQSAASGSTLLGKYCLASL------------- 143
            |..:..||.|...:||..|:...||.|:.|.|:    ||..:..|:||...:             
 Worm   112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAAL----ASDGSFDGQYCRIEMEVPDAGVESGCPQ 172

  Fly   144 --PLQQLLGNVGRMMNVQTAVCFPASCSATNMDTLLRRVLKQLVGLELNSNQNLVSENSCKTSER 206
              ||..:||           ||||::||..::.|:....|...:.:|            |::..|
 Worm   173 TDPLSIILG-----------VCFPSACSVADLTTVSSIYLPYNLKVE------------CESQNR 214

  Fly   207 DAYDGGAIAAIVILSVFGGAVIISTFYDYFLCADQNKLPAILKVFSARANSRSLFRITTKPNPNV 271
            .::  ..:..::||.|:.....::||       ..:...:||..||...|::..|. |.:.:|| 
 Worm   215 WSF--VTVLLLIILMVWIVPQAVATF-------QTSSNDSILSCFSIPDNAKRTFS-TRRESPN- 268

  Fly   272 IECLHGLRGMSLIWVCFG--HDFII-----------SMTSPNINLYDVYTWAKTPFKDIIQEGVF 323
            :..:|||..:....:..|  ::|::           .::|..:::.:.|::.        .:|:.
 Worm   269 LHVVHGLEFLLFFTIVSGMVYNFMLPYIENVAFAFEGVSSFPMHIVNNYSYQ--------IDGLL 325

  Fly   324 AVDSFFFISGLLVAMVALRSMEKAKGKLNIPLMYLHRYLRLTPIVAVSILLYWKLLPHLGDGPLY 388
            |:.:|:....|...::.|||      ..:..||   |..|..|...|.:|..:.:.|.:..||: 
 Worm   326 ALSAFYTTYLLFGNILTLRS------AFDYILM---RLFRFWPAYIVCVLFMYVIFPGVSSGPM- 380

  Fly   389 GNW-NFDSYDRCEGNWYWTLLYVQNY--ATDSECLAHTWYLAIDTQLYIIAPILLIIVYKWGKKG 450
              | :.|:.:||...|:..:|::.|:  .||: |:...:.::::.|.|.|...::.:..|:    
 Worm   381 --WIHTDTVNRCGSGWWKNILFINNWFNVTDT-CVDIGYVISMEAQYYAILIFVIFLSSKY---- 438

  Fly   451 AAVVLLLLLGLTAYLFSIIVINNYSLISGGGGGGPDDYSEDL--------------------DHY 495
              .:|..|...|.:..|||    :|.:..        ||::|                    |..
 Worm   439 --PLLTQLFAYTVFGSSII----FSFVRA--------YSQELPPAPMLTLEPVPLTKVYAVFDQL 489

  Fly   496 THN---RASGWLVGFLFG----------------YFLHTIRGKAIKLSRPAVWIGWITCLAFLFT 541
            ..:   |:|.:.:||:||                |.:|.:..              |.|:||...
 Worm   490 LLSLFARSSNYCLGFIFGIGCATASDELRESGLSYCMHKLLA--------------IICIAFAVV 540

  Fly   542 CIFAMYPYGTGKSKTLPTLNEAFYVSLSRIAWPLGLSWVVFACMQGYGGLANSFLTSPL-WQ--- 602
            .....:||......:...:..|.|.:|.|..|...|...|:.|  .:|..:..:|.:.| |:   
 Worm   541 PFVGAFPYSAYAWVSNFEIMNASYAALHRPMWSFALLSFVYLC--HHGAFSKEWLNALLEWRVFA 603

  Fly   603 PLSKLSFCAYMGH-----LFIQNLN--AGRTRVNTYFSNYDIMLRFWQDFGFTVLLAY--VMY-- 656
            ||||:::.|.:..     .|..:||  |..|..:|.::...           |.||||  .|:  
 Worm   604 PLSKVTWIALVVAEPIILYFFSSLNKPAYATHWSTMYTAIS-----------TALLAYFVAMFLD 657

  Fly   657 ILIEAPCGGLESLILPNRR 675
            |.:..|   :..||.|.::
 Worm   658 IFVTRP---IRYLIYPEQK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5892NP_650959.2 NRF 90..203 CDD:214781 31/125 (25%)
OafA 275..677 CDD:441440 97/471 (21%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 31/129 (24%)
Acyl_transf_3 334..649 CDD:473885 78/372 (21%)

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