DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3337 and Atpsckmt

DIOPT Version :9

Sequence 1:NP_001303427.1 Gene:CG3337 / 42519 FlyBaseID:FBgn0038871 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_001102648.1 Gene:Atpsckmt / 499561 RGDID:1560629 Length:216 Species:Rattus norvegicus


Alignment Length:194 Identity:87/194 - (44%)
Similarity:117/194 - (60%) Gaps:6/194 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAKTPKSG---MSTGGKILIAATGGVGIGLSIVCASFVAPAFRRICLPYVPATTEQIQNVLSFLP 73
            |..:|:|.   .|..|.::....||..:.:..|...|:|||.|::|||:||||:.|::||:..| 
  Rat    17 LPTSPESDSLKTSNWGFLITGVIGGALVTVYAVTTPFIAPALRKVCLPFVPATSRQVENVVKML- 80

  Fly    74 KNSAGKLLDIGSGDGRIVVAAAQHCGALKADGVELNPWLVYYSRLAALRHSVSKRTRFFRRDLWK 138
            ::..|.|:||||||||||:|||:  ....|.|.|||||||:|||..|.|..|....:|:..||||
  Rat    81 QHRRGPLVDIGSGDGRIVIAAAK--AGFPAVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWK 143

  Fly   139 FDIKDYNFVVIFGVEQMMQDLEHKLIAECPHNTKIIACRFPLPSLEHVKIIEDGVNTVWFYDLN 202
            .....|:.||||||.|||..||.||..|.....::||||||.|.........:|::|||.||::
  Rat   144 VTFAQYSNVVIFGVPQMMPQLEKKLEFELEDGARVIACRFPFPHWTPDHTTGEGIDTVWAYDMS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3337NP_001303427.1 Methyltransf_18 78..167 CDD:289607 49/88 (56%)
AtpsckmtNP_001102648.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 3/7 (43%)
Required for mitochondrial location. /evidence=ECO:0000250|UniProtKB:Q6P4H8 51..85 16/34 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341460
Domainoid 1 1.000 161 1.000 Domainoid score I3911
eggNOG 1 0.900 - - E1_COG0500
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16780
Inparanoid 1 1.050 162 1.000 Inparanoid score I4124
OMA 1 1.010 - - QHG48183
OrthoDB 1 1.010 - - D1605787at2759
OrthoFinder 1 1.000 - - FOG0007117
OrthoInspector 1 1.000 - - otm45095
orthoMCL 1 0.900 - - OOG6_101641
Panther 1 1.100 - - LDO PTHR13610
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5204
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.